Discovery Accelerated
Share insights about drug discovery and development

Happy Valentines Day

February 15, 2010 15:19 by EmileBellott

 

 
Valentines day candies brought to mind the story of Professor Ugi and the artificial sweetener that he made in his home laboratory.  I was wondering about the variety of artificial sweeteners that have been discovered -- and how sweet they really are.  Finally, what are their chemical structures ?
 
 
A quick look at Wikipedia provides a list of the most common synthetic chemical sweeteners.  Note that not all of these materials are still approved for human use.  As we have gained a greater knowledge of toxicology and side effects on living organisms, only a few of these are approved for food use -  depending on the country and regulatory authority.
 
 

 
 Mainly, the artificial sweeteners are products of chemical synthesis.  The approved sweeteners  have several characteristics in common:
 
1.  Sweet taste
2.  Non-toxic
3.  Inexpensive to manufacture
4.  Many times sweeter than sugar
 
The last characteristic is important, because natural cane or beet  sugar ( sucrose) is cheap and plentiful in pure form.  It is one of the most widely traded commodities in the world, accounting for over 2 percent of the global dry cargo market.  When I first studied organic chemistry, it was said that Sucrose was the single pure chemical substance produced in the greatest quantity, worldwide.
 
How sweet are these sweeteners ?  They range from 30 x to 8000 x the sweetness of sugar .  See the bar-graph, below.
 

Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Categories:
Actions: E-mail | Permalink | Comments (0) | Comment RSSRSS comment feed

Chemistry of Chocolate and Roses

February 10, 2010 22:55 by GregRublev

This is the most popular newsletter in our history.  I suppose it makes sense: who doesn't like chocolate or roses?  Hope valentine's day goes off without a hitch for everyone!

-----------------------------------------------------------------------

February 2010 Newsletter 

Greetings!

February is here and with it Valentine's Day.  Bad food, long waits and poor service.  But if you get past all of the force feed love there is a lot of chemistry.  The video touches on some interesting chemistry with chocolate and roses. Enjoy.

Chocloate and Roses
CHICAGO --- A researcher from Northwestern University Feinberg School of Medicine has invented a novel way to halt and even reverse rheumatoid arthritis. He developed an imitation of a suicide molecule that floats undetected into overactive immune cells responsible for the disease.

Whimsically referred to as Casper the Ghost, the stealthy molecule causes the immune cells to self-destruct. Read More 

A new therapeutic made from tobacco plants has been shown to arrest West Nile virus infection, according to a new study by Arizona State University scientist Qiang Chen and his colleagues.

Chen, a researcher at Arizona State University's Biodesign Institute and professor in the College of Technology and Innovation, on the Polytechnic campus, is the first to demonstrate a plant-derived treatment to successfully combat West Nile virus after exposure and infection. The research appears in this week's issue of the Proceedings of the National Academy of Sciences (advanced online edition). Read More 

 

I know there are projects that need custom synthesis, medicinal chemistry or chemical consulting.  Why wait any longer submit an inquiry or use our Ask-A-Chemist service! 

Sincerely, 
Bryan Roland, Director - Project Management 
Bryan.Roland@asischem.com

Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Don't Try This at Home

February 7, 2010 14:03 by EmileBellott

What are the attributes that lead to success ?  For scientists, artists,  musicians, and athletes, Malcolm Gladwell, in his best-selling book, "Outliers"  observes that in every field of endeavor, outstanding tendencies show up at an early age -- and mastery is built on more than  10,000 hours of experience.

National technological competitiveness has been attributed to  a baby-boom cohort of people who had learned hands-on through  youthful hobbies such as electronics, auto mechanics, other do-it-yourself endeavors. 

Chemistry is the same.  At almost every award ceremony and scientific conference, the presenter regales the audience with tales of  early experiences with home laboratories, explosions, pyrothechics, and smelly chemical experiments in the basement ( and the family doq was lucky to stay safely out of the way).  Just about everyone has heard a story like this.  The story below was related first-hand, from the great chemist, Ivar Ugi, himself...

Professor Ivar Ugi ( 1930-2005 ) was a famous organic chemist, who studied the chemistry of isonitriles; invented the multicomponent condensation reaction known as the Ugi Reaction; and made major contributions to theoretical chemistry.  

Prof. Ugi, who was on the short list for the 1998  nobel prize in chemistry, was the first investigator to use the term "chemical library" to describe the outcome of a combinatorial synthesis scheme.

In his illustrious career, he was the youngest ever, Director of Research at Bayer AG, and subsequently had a highly prolific career in academia, at USC and Technical University of Munich.  

I became acquainted with Prof Ugi in 1995, when he was a consultant for my group at Pharm-Eco Laboratories.

How did he get started in chemistry ?  It was an early interest - in his home laboratory, as a boy.

In the spring of 1996, professor Ugi related the following story to me:

"I got interested in chemistry during the war (WW-II) because I enjoyed games with explosions.  At age 15 I got some little book about chemistry and explosives and read and read .  I found out how one could produce artificial sweeteners by converting a headache medicine.

"Just after the war saccharine was not available  Sugar was not available.  So I read the chemical literature and I found one of these sweetening compounds [ Dulcin] that could be easily made from some pharmaceutical drugs that I could buy.... Some headache pills [Phenacetin].  I learned to convert it into sweetening compounds.

"So the first thing that I was doing in chemistry at home -- and the house was smelly and full of hydrochloric acid, et cetera.  I succeeded in producing these sweeteners, which I was then selling to people."

x

Method for converting the pain medicine, Phenacetin, to the

sweetener, Dulcin, hand written by Prof Ugi, on the back of

an airport parking receipt,  in 1996.

 He made the sweetener and exchanged it for goods and money with his neighbors.  He had read so much chemistry by the time he attended the university of Tübingen, he did not need any additional background and was able to spend almost all of his time doing research in the laboratory.

Prof Ugi, in his office at Technical University of Munich, in 1995 

 

Download Ugi bio:

www.bos06.ttu.ee/files/abstracts/Domling.pdf

 

 


Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Categories:
Actions: E-mail | Permalink | Comments (1) | Comment RSSRSS comment feed

Bioavailability: The Secret of Success is Just Being There

January 26, 2010 03:12 by EmileBellott

In drug development, bioavailability of a drug in the target tissue is a necessary precondition of the therapeutic benefit. Beyond this, however, it's necessary to consider how the drug can actually get from the bottle – to the desired point of action.

Due to the greater number of patients taking one or more drugs for chronic conditions, it is increasingly imperative to design drugs that can be administered orally. Oral administration is a practical and highly economic mode of therapy, that simplifies the delivery of medical care and improves patient compliance with the intended dosing regimen.

In a drug development program, drug-like properties are designed in at the lead-optimization stage, by synthesis of many analogs, careful observation of their properties, and application of medicina chemistry principles.


 

 

Lipinski's Rules...  How to make a compound that has good oral bioavailability

In a study of thousands of drug compounds, Chris Lipinski, then at Pfizer, observed a regularity in “Drug-Like Properties” of the many compounds that were successfully administered orally – had good oral bioavailability.  In addition to being water soluble, such drugs had properties and attributes that became known as “Lipinski's Rule of Five”, or more commonly, Lipinski's Rules:

Ideal Properties of an Orally available Drug

 Molecular weight -- less than 500 daltons

Octanol/Water partition coefficient, logP – less than 5

No more than 5 Hydrogen-bond donors

No more than 10 Hydrogen-bond acceptors

Rotatable bonds -- less than 1

_____________________________________________

Ref:  C. A. Lipinski, “Drug-Like Properties and The Causes of Poor Solubility and Poor Permeability”, J. Pharmacol. Toxicol. Methods, 44, 235 (2000)

  

As a generalization good water solubility is favored by low molecular weight; low logP; more H-Bond donors and acceptors; and greater charge and/or polarity. Membrane absorption is favored by higher logP; less H-bonding; less charge and polarity, and more flexibility. All of these same factors also have a bearing on metabolism and elimination, as well.

Achieving a drug with favorable oral bioavailability involves a trade off of physicochemical properties in the proposed drug molecule. Hence the general guidelines given above provide guidance as to what has worked in the past in the majority of instances.

The most recent review of these factors concludes that lipophilicity; percent polar surface area; and H-Bond donor count are the most important. Average values have not changed significantly between populations of pre-1983 and post –1983 drug compounds. In contrast, mean values of molecular weight, N+O count; H-Bond acceptor count; rotatable bonds and rings have increased 13 to 29% in the post 1983 drug group.

Properties of marketed oral drugs:


Compound Property

Average of Oral Drugs

1983-2002

Molecular Weight

377

cLogP

2.5

HB Donors

1.77

HB Acceptors

( N+O ) 3.74

Rotatable Bonds

6.42

Polar Surface Area

102.2

Rings

2.88


Ref:  P. D. Leeson and A. M. Davis, “Time-Related Differences in the Physical Property Profiles of Oral Drugs”, J. Med Chem., 47, 6338 (2004)

 


Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Categories:
Actions: E-mail | Permalink | Comments (1) | Comment RSSRSS comment feed

Removing Plaque from Alzheimer Brains

January 15, 2010 03:10 by asischemadmin

January 2010 Newsletter  

Greetings!

I hope everyone had a joyous holiday season!  Though some of you might have had a fantastic 2009 I am betting the majority of us are looking forward to a more prosperous 2010.  To start us of on the right foot we are co-hosting a workshop in the Boston area focused on obtaining funding for drug discovery projects.  If you are in the area we would love to see you.  If not, you can always contact Mel Bellott for information about:

  • The value of early ADMET screening of candidate compounds
  • How medicinal chemistry efforts contribute to your program's success
  • Developing a program framework for drug discovery
  • Lead compound strategy

 

As always enjoy!


--------------------------------------------------------------------
Chemistry (The Dork Song) (click for video)




"Nano Cocktail" to Target and Kill Tumors A team of researchers in California and Massachusetts has developed a "cocktail" of different nanometer-sized particles that work in concert within the bloodstream to locate, adhere to and kill cancerous tumors. Read More

Nanoparticles Bypass Mucus Barrier, May Deliver Drugs  Johns Hopkins University researchers have created biodegradable nanosized particles that can easily slip through the body's sticky and viscous mucus secretions to deliver a sustained-release medication cargo. The researchers say that these nanoparticles, which degrade over time into harmless components, could one day carry life-saving drugs to patients suffering from dozens of health conditions, including diseases of the eye, lung, gut or female reproductive tract. Read More

Scientists Remove Plaque from Brains with Alzheimer's Disease A breakthrough discovery by scientists from the Mayo Clinic in Jacksonville, FL, may lead to a new treatment for Alzheimer's Disease that actually removes amyloid plaques-considered a hallmark of the disease-from patients' brains. This discovery, is based on the unexpected finding that when the brain's immune cells (microglia) are activated by the interleukin-6 protein (IL-6), they actually remove plaques instead of causing them or making them worse. The research was performed in a model of Alzheimer's disease established in mice. Read More 


------------------------------------------------------------------------
I know there are projects that need custom synthesis, medicinal chemistry or chemical consulting. Why wait any longer submit an inquiry!

Sincerely,

 

Bryan Roland,

Director - Project Management

Bryan.Roland@asischem.com


Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

AsisChem Invited To participate In ADMET for Drug Discovery workshops

January 5, 2010 01:59 by asischemadmin
On Wednesday, January 6 and again, on Thursday, January 21,  AsisChem will participate in Apredica's  workshop titled "ADMET for Drug Discovery".  The breakfast workshops will  help academic scientists,  preparing drug-discovery focused grant applications, to realize the full potential of early screening techniques that can be applied to developmental compounds.  Click here to register.

The power of in-vitro ADMET screening, coupled with a  medicinal chemistry program, is to advance the compounds most likely to succeed.  The testing paradigm helps weed out compounds that wouldn't have made it for reasons of toxicity or bioavailability, or physicochemical properties, before they are advanced to the more costly stages of preclinical- and clinical- development.

Scientists from Apredica and AsisChem will be available to interact with attendees at the meetings and discuss how these assays and strategies will strengthen grant proposals and build the groundwork for project success.

Apredica Director of Business Development, Carol Gebert, added that "The objective is to develop the most promising drug candidate, overall.  Not just the strongest binding compound."

The workshops will be offered January 6 and January 21 from 8 to 12 at Apredica, 313 Pleasant Street,  Watertown, MA.  Click here to register. 

Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Happy Holidays From AsisChem!

December 24, 2009 00:30 by asischemadmin
The year is drawing to a close, and it is a great time to pause and reflect on the events of the last twelve tumultuous months.  Most people would describe 2009 as difficult, stressful and filled with uncertainty.  There has been no shortage of layoffs, big pharma mergers, biotech bankruptcies and consolidation in the pharma services industry. The shake-ups have touched virtually every professional in the pharma and biotech industries.  Here at AsisChem, we also faced many challenges as we grew over 100% year over year.

The good news is that this year is over, and 2010 promises to be quite a bit different, with many companies having completed their restructuring and receiving  funding for new drug discovery and development projects.  We are working with a number of companies now with a very positive outlook for the next 12 months, and we are excited to be part of several discovery efforts to develop therapeutics for oncology, anti-viral, CNS and several other indications.

We would like to extend our best wishes to our current, past and future customers, our partners, and all others reading this blog.  

Happy Holidays!!!

Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Categories: General
Actions: E-mail | Permalink | Comments (0) | Comment RSSRSS comment feed

Nano-Scale Drug Delivery For Chemotherapy

November 6, 2009 04:50 by asischemadmin

November 2009 Newsletter  

Greetings!

We have very exciting news this month. AsisChem now has a blog! This newsletter is now posted for access at anytime (and you can look back at old issues with fond memories). Also, we will have articles, commentary and other extremely important and interesting information. So enjoy this newsletter and sign-up to receive notifications of blog updates.
--------------------------------------------------------------------
Organic Reactions Song (click for video)


This Is Your Brain On Fatty AcidsSaturated fats have a deservedly bad reputation, but Johns Hopkins scientists have discovered that a sticky lipid occurring naturally at high levels in the brain may help us memorize grandma's recipe for cinnamon buns, as well as recall how, decades ago, she served them up steaming from the oven. Read More

Slimming Gene Regulates Body Fat Scientists at the University of Bonn have discovered a previously unknown fruit fly gene that controls the metabolism of fat. Larvae in which this gene is defective lose their entire fat reserves. Therefore the researchers called the gene 'schlank' (German for 'slim'). Mammals carry a group of genes that are structurally very similar to 'schlank'. They possibly take on a similar function in the energy metabolism. The scientists therefore have hopes in new medicines with which obesity could be fought. Read More

Nano-Scale Drug Delivery For ChemotherapyGoing smaller could bring better results, especially when it comes to cancer-fighting drugs. Duke University bioengineers have developed a simple and inexpensive method for loading cancer drug payloads into nano-scale delivery vehicles and demonstrated in animal models that this new nanoformulation can eliminate tumors after a single treatment. After delivering the drug to the tumor, the delivery vehicle breaks down into harmless byproducts, markedly decreasing the toxicity for the recipient. Read More


------------------------------------------------------------------------
I know there are projects that need custom synthesis, medicinal chemistry or chemical consulting. Why wait any longer submit an inquiry!

Sincerely,

Bryan Roland,

Director - Project Management

Bryan.Roland@asischem.com


Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Welcome Dr. Emile Bellott, Director of Medicinal Chemistry Services

November 5, 2009 02:01 by asischemadmin
We are pleased to announce that Dr. Emile (Mel) Bellott has joined our growing team as the Director of Medicinal Chemistry Services. In more than 25 years of industry experience, his pharmaceutical activities have focused on drug discovery and development, synthesis and design of small molecule therapeutics, and informatics and structural biology. He will be working closely with our customers, with our US-based medicinal chemistry team and with our Russia-based synthetic chemistry team, to develop and execute successful small molecule therapeutics discovery programs.

Prior to AsisChem, Mel co-founded and served as VP of Operations of two development-stage biotech companies and directed medicinal chemistry activities at several emerging pharmaceutical and medical technology companies. His operational experience spans medical devices, pharmaceutical development, chemistry outsourcing, and life science software. He is co-inventor on over 10 issued US patents and multiple patent applications. He earned a PhD in Physical Organic Chemistry from Harvard and a MBA from the Harvard Business School.

Mel is a prolific author and some of his recent articles on industry trends are quoted below:

Global Environments: Navigating the Perfect Storm
Today’s pharmaceutical and biotech industry sectors are largely a product of the late 20th century. In the post-industrial era, manufacture and provision of pharmaceutical drugs have been organised and have prospered as fully integrated business units. One of the trends of today is the formation of new enterprises on a geographically dispersed virtual business model...

Adaptation to the New Industry Landscape
The pharmaceutical and biotech sectors are in the midst of unprecedented and disruptive change. The industry is straining to adjust to the economic and competitive forces at work in the global environment. The success formula for value creation and sustainable economic and competitive advantage is being redefined by an evolving understanding of the global marketplace and industry landscape...

RNAi – A Glass Half-Full
Gene silencing by RNA interference (RNAi) has captured the imagination of Wall Street and a new generation of biotech entrepreneurs. Rarely has there been so great a buzz surrounding a new therapeutic paradigm, including multi-billion dollar deals, venture capital funding of numerous start-ups and a Nobel Prize – all before the first marketing approval...
A Season of Turbulence
By late 2008, it was abundantly clear that the deepening economic recession would not leave the biotech sector untouched. In fact, the capital structure of the smaller pharmaceutical and biotech enterprises and their symbiotic relationship with the sources of private equity investment has left them vulnerable to the same forces that decimated the home mortgage industry...

Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5

Brain Proteins Suggest Possible Way to Fight Alzheimer's

October 8, 2009 23:23 by asischemadmin

October 2009 Newsletter  

Greetings!

Happy Mole Day! I suppose have a scary Halloween as well. I don't know what is going on for Halloween, but I am definitely celebrating Mole day with Chicken Mole from my favorite Mexican restaurant (an old tradition from my time in Tucson, Az). I hope whichever holiday you choose to participate in you enjoy it as much as I will. Anyway, there were so many interesting research articles to choose from this month I just chose a few I thought you might like. Enjoy.

The Mole Song



Brain Proteins Suggest Possible Way to Fight Alzheimer's

DALLAS - Oct. 6, 2009 - The action of asmall protein that is a major villain in Alzheimer's disease can becounterbalanced with another brain protein, researchers at UT Southwestern Medical Center have found in an animal study.

The findings, available online in the journal Proceedings of the National Academy of Sciences, suggest a promising new tactic against the devastating illness, the researchers said. Read More

How Soy Reduces Diabetes Risk

AMHERST, Mass. -Nutrition scientists led by Young-Cheul Kim atthe University of Massachusetts Amherst have identified the molecularpathway that allows foods rich in soy bioactive compounds calledisoflavones to lower diabetes and heart disease risk. Eating soy foodshas been shown to lower cholesterol, decrease blood glucose levels andimprove glucose tolerance in people with diabetes. Read More

A Step Toward Better Brain Implants Using Conducting Polymer Nanotubes

ANN ARBOR, Mich.-Brain implants that can more clearly record signalsfrom surrounding neurons in rats have been created at the University ofMichigan. The findings could eventually lead to more effectivetreatment of neurological disorders such as Parkinson's disease andparalysis. Neural electrodes must work for time periods ranging from hours toyears. When the electrodes are implanted, the brain first reacts to theacute injury with an inflammatory response. Then the brain settles intoa wound-healing, or chronic, response. Read More

Please send us some questions, inquiries, challenges or anything else chemistry related. Put our expert chemists to the test by submitting an inquiry!

Sincerely,
Bryan Roland, Director - Project Management
Bryan.Roland@asischem.com

Be the first to rate this post

  • Currently 0/5 Stars.
  • 1
  • 2
  • 3
  • 4
  • 5